![]() These spectral families are all the nodes that are connected to each other. Users can see all the distinct spectral families that comprise the entire molecular network. View Spectra Families allows users to look at the molecular networks at a higher level. To visualize each spectrum, we can click the "View Spectrum" button. This brings up all the input MS/MS spectra. To view all the input MS/MS spectra that went into the consensus spectrum, click the link in the "ClusterIdx" link Check out the details about annotation - Annotation Documentation. Then Click "AnnotatetoGNPS" to be taken to the annotation page with the spectrum prepopulated. To help annotate these unidentified spectra, click the "AnnotatetoGNPS" to be taken to the view that allows you to choose a specific MS/MS spectrum to annotate. While Molecular Networking matches to all public reference libraries, the majority of molecules detected in untargeted LC/MS runs are unidentified. View All Clusters allow a user to view the all consensus spectra in the molecular networking analysis. To view the quality of the MS/MS match, click "View Mirror Match" to display a mirror plot This view shows all the library matches between the consensus MS/MS spectra and the GNPS MS/MS Spectral Libraries. Molecular Networking Views View All Library Hits ¶ Molecular Networking - Analog Discovery in Microbial Extractsįeature-Based Molecular Networking (FBMN) with MZmine2 - Microbiome Molecules in Fecal Samples in American Gut ProjectįBMN with MS-DIAL - Microbiome Molecules in Fecal Samples in American Gut Project Open-source Method for Reference Library Generationĭata Acqusition - Thermo QExactive (v1.0) Reference Spectral Library mzVault Addition Reference Spectral Library Batch Addition MS2LDA and MotifDB Substructure DiscoveryĪdd/Curate Reference Spectrum in the Library View Principle Coordinate Analysis (PCoA) Plots GC-MS Library Search and Molecular Networkingĭetailed Interrogation of Network Spectra ![]()
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